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Infrastructure for dynamic knowledge integration - Automated biomedical ontology extension using textual resources

  • Vít Nováček
  • , Siegfried Handschuh
  • , Brian Davis
  • University of Galway
  • University of Liverpool

Research output: Contribution to a Journal (Peer & Non Peer)Articlepeer-review

16 Citations (Scopus)

Abstract

We present a novel ontology integration technique that explicitly takes the dynamics and data-intensiveness of e-health and biomedicine application domains into account. Changing and growing knowledge, possibly contained in unstructured natural language resources, is handled by application of cutting-edge Semantic Web technologies. In particular, semi-automatic integration of ontology learning results into a manually developed ontology is employed. This integration bases on automatic negotiation of agreed alignments, inconsistency resolution and natural language generation methods. Their novel combination alleviates the end-user effort in the incorporation of new knowledge to large extent. This allows for efficient application in many practical use cases, as we show in the paper.

Original languageEnglish (Ireland)
Pages (from-to)816-828
Number of pages12
JournalJournal Of Biomedical Informatics
Volume41
Issue number5
DOIs
Publication statusPublished - 1 Jan 2008

Keywords

  • Biomedical ontologies
  • Dynamic ontology integration
  • Knowledge acquisition
  • Lifecycle
  • Ontology alignment and negotiation
  • Ontology evolution
  • Ontology learning

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