Skip to main navigation Skip to search Skip to main content

CCPlotR: an R package for the visualization of cell-cell interactions

  • The SFI Centre for Research Training in Genomics Data Science
  • University of Galway

Research output: Contribution to a Journal (Peer & Non Peer)Articlepeer-review

12 Citations (Scopus)

Abstract

We present CCPlotR-an R package that generates visualizations of cell-cell interactions. CCPlotR is designed to work with the output of tools that predict cell-cell interactions from single-cell gene expression data and requires only a table of predicted interactions as input. The package can generate a comprehensive set of publication-ready figures such as heatmaps, dotplots, circos plots and network diagrams, providing a useful resource for researchers working on cell-cell interactions.

Original languageEnglish
Article numbervbad130
JournalBioinformatics Advances
Volume3
Issue number1
DOIs
Publication statusPublished - 2023

Fingerprint

Dive into the research topics of 'CCPlotR: an R package for the visualization of cell-cell interactions'. Together they form a unique fingerprint.

Cite this