Research output per year
Research output per year
Personal profile
Biography
2015-to date: Lecturer (BioinformaticsBiomedical Genomics), School of Mathematical amp; Statistical Sciences, NUIG2009-2015: Bioinformatician, Department of Genetics (Div. of Computational Genetics), Albert Einstein College of Medicine, New York2006-2009: Doctoral researcher, National Centre for Biomedical Engineering Science (NCBES), NUIG2004-2006: Graduate researcher, Computational Intelligence Research Group (CIRG), NUIG
Research Interests
I am a PI in the Bioinformatics and Biostatistics Research Cluster where my group is primarily interested in the development and application of statisticalmachine learning methods with a particular focus on genomics applications in immunology, cancer and neuroscience. My research has been funded by SFI, HRB, IRC, and the European Commission.
Teaching Interests
Medical genomics, genomics data analysis, bioinformatics
Expertise related to UN Sustainable Development Goals
In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):
Education/Academic qualification
B.A.,M.Sc.,PhD
Accepting PhD Students
- Accepting PhD Students
Fingerprint
Dive into the research topics where Pilib Ó Broin is active. These topic labels come from the works of this person. Together they form a unique fingerprint.
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Collaborations and top research areas from the last five years
Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
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Computational approaches and challenges in the analysis of circRNA data
Digby, B., Finn, S. & Ó Broin, P., Dec 2024, In: BMC Genomics. 25, 1, 527.Research output: Contribution to a Journal (Peer & Non Peer) › Review article › peer-review
Open Access4 Citations (Scopus) -
Deep feature batch correction using ComBat for machine learning applications in computational pathology
Murchan, P., Ó Broin, P., Baird, A. M., Sheils, O. & P Finn, S., Dec 2024, In: Journal of Pathology Informatics. 15, 100396.Research output: Contribution to a Journal (Peer & Non Peer) › Article › peer-review
Open Access -
Surrogate Biomarker Prediction from Whole-Slide Images for Evaluating Overall Survival in Lung Adenocarcinoma
Murchan, P., Baird, A. M., Ó Broin, P., Sheils, O. & Finn, S. P., Mar 2024, In: Diagnostics. 14, 5, 462.Research output: Contribution to a Journal (Peer & Non Peer) › Article › peer-review
Open Access -
CCPlotR: an R package for the visualization of cell-cell interactions
Ennis, S., Broin, P. O. & Szegezdi, E., 2023, In: Bioinformatics Advances. 3, 1, vbad130.Research output: Contribution to a Journal (Peer & Non Peer) › Article › peer-review
Open Access6 Citations (Scopus) -
Cell-cell interactome of the hematopoietic niche and its changes in acute myeloid leukemia
Ennis, S., Conforte, A., O'Reilly, E., Takanlu, J. S., Cichocka, T., Dhami, S. P., Nicholson, P., Krebs, P., Ó Broin, P. & Szegezdi, E., 16 Jun 2023, In: iScience. 26, 6, 106943.Research output: Contribution to a Journal (Peer & Non Peer) › Article › peer-review
Open Access10 Citations (Scopus)
Activities
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Roman Lambert
Ó Broin, P. (Co-Supervisor)
2024 → …Activity: Other › Current Postgraduates (Research) Supervised
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Karen Guerrero Vazquez
Ó Broin, P. (Co-Supervisor)
2024 → …Activity: Other › Current Postgraduates (Research) Supervised
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Barry Digby
Ó Broin, P. (Primary Supervisor)
2024 → …Activity: Other › Current Postgraduates (Research) Supervised
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Kevin Ryan
Ó Broin, P. (Primary Supervisor)
2024 → …Activity: Other › Current Postgraduates (Research) Supervised
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Coiste Straitéiseach na Gaeilge(Internal) (External organisation)
Ó Broin, P. (Member)
20 Oct 2021 → …Activity: Membership › Membership of committee